J3_7NWG_041
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GCUCGUAGUUGGA*UUAAGAG*CAUUAAUCAAGAAC
- Length
- 34 nucleotides
- Bulged bases
- 7NWG|1|A2|G|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|A2|G|673
7NWG|1|A2|C|674
7NWG|1|A2|U|675
7NWG|1|A2|C|676
7NWG|1|A2|G|677
7NWG|1|A2|U|678
7NWG|1|A2|A|679
7NWG|1|A2|G|680
7NWG|1|A2|U|681
7NWG|1|A2|U|682
7NWG|1|A2|G|683
7NWG|1|A2|G|684
7NWG|1|A2|A|685
*
7NWG|1|A2|U|917
7NWG|1|A2|U|918
7NWG|1|A2|A|919
7NWG|1|A2|A|920
7NWG|1|A2|G|921
7NWG|1|A2|A|922
7NWG|1|A2|G|923
*
7NWG|1|A2|C|1019
7NWG|1|A2|A|1020
7NWG|1|A2|U|1021
7NWG|1|A2|U|1022
7NWG|1|A2|A|1023
7NWG|1|A2|A|1024
7NWG|1|A2|U|1025
7NWG|1|A2|C|1026
7NWG|1|A2|A|1027
7NWG|1|A2|A|1028
7NWG|1|A2|G|1029
7NWG|1|A2|A|1030
7NWG|1|A2|A|1031
7NWG|1|A2|C|1032
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain 51
- Large subunit ribosomal RNA; LSU rRNA
- Chain I2
- ribosomal protein eS7
- Chain M2
- 40S ribosomal protein S11
- Chain O2
- ribosomal protein uS15
- Chain X2
- Ribosomal protein S15a
- Chain Y2
- Ribosomal protein S23
- Chain c2
- 40S ribosomal protein S27
Coloring options: