J3_7NWG_055
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGGA*UACACUG*CGUGAUGGGGAUCGGGGAUUGCAAUUAUUCCCCAUGAACGAGGAAU
- Length
- 58 nucleotides
- Bulged bases
- 7NWG|1|A2|U|1535, 7NWG|1|A2|G|1598, 7NWG|1|A2|U|1599, 7NWG|1|A2|G|1603, 7NWG|1|A2|U|1621, 7NWG|1|A2|U|1622, 7NWG|1|A2|A|1623
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|A2|G|1224
7NWG|1|A2|U|1225
7NWG|1|A2|G|1226
7NWG|1|A2|G|1227
7NWG|1|A2|A|1228
*
7NWG|1|A2|U|1530
7NWG|1|A2|A|1531
7NWG|1|A2|C|1532
7NWG|1|A2|A|1533
7NWG|1|A2|C|1534
7NWG|1|A2|U|1535
7NWG|1|A2|G|1536
*
7NWG|1|A2|C|1597
7NWG|1|A2|G|1598
7NWG|1|A2|U|1599
7NWG|1|A2|G|1600
7NWG|1|A2|A|1601
7NWG|1|A2|U|1602
7NWG|1|A2|G|1603
7NWG|1|A2|G|1604
7NWG|1|A2|G|1605
7NWG|1|A2|G|1606
7NWG|1|A2|A|1607
7NWG|1|A2|U|1608
7NWG|1|A2|C|1609
7NWG|1|A2|G|1610
7NWG|1|A2|G|1611
7NWG|1|A2|G|1612
7NWG|1|A2|G|1613
7NWG|1|A2|A|1614
7NWG|1|A2|U|1615
7NWG|1|A2|U|1616
7NWG|1|A2|G|1617
7NWG|1|A2|C|1618
7NWG|1|A2|A|1619
7NWG|1|A2|A|1620
7NWG|1|A2|U|1621
7NWG|1|A2|U|1622
7NWG|1|A2|A|1623
7NWG|1|A2|U|1624
7NWG|1|A2|U|1625
7NWG|1|A2|C|1626
7NWG|1|A2|C|1627
7NWG|1|A2|C|1628
7NWG|1|A2|C|1629
7NWG|1|A2|A|1630
7NWG|1|A2|U|1631
7NWG|1|A2|G|1632
7NWG|1|A2|A|1633
7NWG|1|A2|A|1634
7NWG|1|A2|C|1635
7NWG|1|A2|G|1636
7NWG|1|A2|A|1637
7NWG|1|A2|G|1638
7NWG|1|A2|G|1639
7NWG|1|A2|A|1640
7NWG|1|A2|A|1641
7NWG|1|A2|U|1642
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain 33
- Transfer RNA; tRNA
- Chain G2
- Ribosomal protein S5
- Chain Q2
- 40S ribosomal protein uS19
- Chain R2
- Ribosomal protein S16
- Chain T2
- 40S ribosomal protein uS13
- Chain U2
- S19
- Chain a2
- ribosomal protein eS25
- Chain e2
- uS14
Coloring options: