J3_7NWH_001

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

7NWH|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|5|C|112
7NWH|1|5|A|113
7NWH|1|5|G|114
7NWH|1|5|C|115
7NWH|1|5|G|116
*
7NWH|1|5|C|155
7NWH|1|5|G|156
7NWH|1|5|U|157
7NWH|1|5|A|158
7NWH|1|5|C|159
7NWH|1|5|G|160
*
7NWH|1|5|C|275
7NWH|1|5|C|276
7NWH|1|5|G|277
7NWH|1|5|G|278

Current chains

Chain 5

28S Ribosomal RNA

Nearby chains

Chain G

L7a

Chain L

60S ribosomal protein L13

Chain N

Ribosomal protein L15

Chain h

uL29

Chain i

60S ribosomal protein L36