J3_7NWH_022
3D structure
- PDB id
- 7NWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CUG*UUCCG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 7NWH|1|9|C|1138, 7NWH|1|9|A|1150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWH|1|9|C|1094
7NWH|1|9|U|1095
7NWH|1|9|G|1096
*
7NWH|1|9|U|1136
7NWH|1|9|U|1137
7NWH|1|9|C|1138
7NWH|1|9|C|1139
7NWH|1|9|G|1140
*
7NWH|1|9|C|1147
7NWH|1|9|A|1148
7NWH|1|9|A|1149
7NWH|1|9|A|1150
7NWH|1|9|G|1151
Current chains
- Chain 9
- 18S Ribosomal RNA
Nearby chains
- Chain AA
- 40S_SA_C domain-containing protein
- Chain VV
- 40S ribosomal protein S21
- Chain WW
- Ribosomal protein S15a
- Chain aa
- 40S ribosomal protein S26
- Chain bb
- 40S ribosomal protein S27
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