3D structure

PDB id
7NWW (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
GAAC*GUUGAU*AAUGAAC
Length
17 nucleotides
Bulged bases
7NWW|1|1|U|2833, 7NWW|1|1|A|2835
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7NWW_013 not in the Motif Atlas
Homologous match to J3_5J7L_048
Geometric discrepancy: 0.1431
The information below is about J3_5J7L_048
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_64069.1
Basepair signature
cWW-tHS-F-F-F-cWW-cWW-F-F
Number of instances in this motif group
1

Unit IDs

7NWW|1|1|G|2812
7NWW|1|1|A|2813
7NWW|1|1|A|2814
7NWW|1|1|C|2815
*
7NWW|1|1|G|2831
7NWW|1|1|U|2832
7NWW|1|1|U|2833
7NWW|1|1|G|2834
7NWW|1|1|A|2835
7NWW|1|1|U|2836
*
7NWW|1|1|A|2882
7NWW|1|1|A|2883
7NWW|1|1|U|2884
7NWW|1|1|G|2885
7NWW|1|1|A|2886
7NWW|1|1|A|2887
7NWW|1|1|C|2888

Current chains

Chain 1
23S rRNA

Nearby chains

Chain D
50S ribosomal protein L3
Chain M
50S ribosomal protein L17
Chain R
50S ribosomal protein L22
Chain a
50S ribosomal protein L32

Coloring options:


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