J3_7NWW_021

3D structure

PDB id

7NWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7NWW_021 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.1298

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

7NWW|1|2|C|990
7NWW|1|2|U|991
7NWW|1|2|U|992
7NWW|1|2|G|993
*
7NWW|1|2|C|1045
7NWW|1|2|A|1046
7NWW|1|2|G|1047
*
7NWW|1|2|C|1210
7NWW|1|2|U|1211
7NWW|1|2|U|1212
7NWW|1|2|A|1213
7NWW|1|2|C|1214
7NWW|1|2|G|1215

Current chains

Chain 2

16S rRNA

Nearby chains

Chain r

30S ribosomal protein S14