3D structure

PDB id
7O19 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
AC*GAUAAGC*GAUUU
Length
14 nucleotides
Bulged bases
7O19|1|BA|A|74
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7O19_014 not in the Motif Atlas
Homologous match to J3_5J7L_037
Geometric discrepancy: 0.0673
The information below is about J3_5J7L_037
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_35667.2
Basepair signature
cWW-cWW-F-F-F-cWW-F-cWW
Number of instances in this motif group
7

Unit IDs

7O19|1|BA|A|56
7O19|1|BA|C|57
*
7O19|1|BA|G|70
7O19|1|BA|A|71
7O19|1|BA|U|72
7O19|1|BA|A|73
7O19|1|BA|A|74
7O19|1|BA|G|75
7O19|1|BA|C|76
*
7O19|1|BA|G|110
7O19|1|BA|A|111
7O19|1|BA|U|112
7O19|1|BA|U|113
7O19|1|BA|U|114

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain B2
50S ribosomal protein L34
Chain BT
50S ribosomal protein L23
Chain BY
50S ribosomal protein L29

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.6736 s