J3_7O1A_011

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UG*UGUUG*CGCAA

Length

12 nucleotides

Bulged bases

7O1A|1|AA|A|1101

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7O1A_011 not in the Motif Atlas

Homologous match to J3_5J7L_009

Geometric discrepancy: 0.0892

The information below is about J3_5J7L_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76043.3

Basepair signature

cWW-cWW-tSS-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

7O1A|1|AA|U|1073
7O1A|1|AA|G|1074
*
7O1A|1|AA|U|1083
7O1A|1|AA|G|1084
7O1A|1|AA|U|1085
7O1A|1|AA|U|1086
7O1A|1|AA|G|1087
*
7O1A|1|AA|C|1098
7O1A|1|AA|G|1099
7O1A|1|AA|C|1100
7O1A|1|AA|A|1101
7O1A|1|AA|A|1102

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AE

30S ribosomal protein S5