3D structure

PDB id
7O1C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
CUUG*CAG*CUUACG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7O1C_007 not in the Motif Atlas
Homologous match to J3_4LFB_005
Geometric discrepancy: 0.145
The information below is about J3_4LFB_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_84394.1
Basepair signature
cWW-tWH-F-F-cWW-F-cWW-F
Number of instances in this motif group
2

Unit IDs

7O1C|1|AA|C|990
7O1C|1|AA|U|991
7O1C|1|AA|U|992
7O1C|1|AA|G|993
*
7O1C|1|AA|C|1045
7O1C|1|AA|A|1046
7O1C|1|AA|G|1047
*
7O1C|1|AA|C|1210
7O1C|1|AA|U|1211
7O1C|1|AA|U|1212
7O1C|1|AA|A|1213
7O1C|1|AA|C|1214
7O1C|1|AA|G|1215

Current chains

Chain AA
Ribosomal RNA 16S

Nearby chains

Chain AN
30S ribosomal protein S14
Chain B9
Peptide chain release factor RF2

Coloring options:


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