J3_7O1C_034
3D structure
- PDB id
- 7O1C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CCUG*CGAUAGUGAACCAGUAC*GGAAAG
- Length
- 27 nucleotides
- Bulged bases
- 7O1C|1|BA|U|34, 7O1C|1|BA|U|448, 7O1C|1|BA|C|456
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7O1C_034 not in the Motif Atlas
- Homologous match to J3_5J7L_067
- Geometric discrepancy: 0.0876
- The information below is about J3_5J7L_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_30040.2
- Basepair signature
- cWW-tWH-F-cWW-tSS-tHH-cSS-tWH-tSW-tHS-cWW-tWH-F-cSH-tSS-F-F
- Number of instances in this motif group
- 7
Unit IDs
7O1C|1|BA|C|32
7O1C|1|BA|C|33
7O1C|1|BA|U|34
7O1C|1|BA|G|35
*
7O1C|1|BA|C|445
7O1C|1|BA|G|446
7O1C|1|BA|A|447
7O1C|1|BA|U|448
7O1C|1|BA|A|449
7O1C|1|BA|G|450
7O1C|1|BA|U|451
7O1C|1|BA|G|452
7O1C|1|BA|A|453
7O1C|1|BA|A|454
7O1C|1|BA|C|455
7O1C|1|BA|C|456
7O1C|1|BA|A|457
7O1C|1|BA|G|458
7O1C|1|BA|U|459
7O1C|1|BA|A|460
7O1C|1|BA|C|461
*
7O1C|1|BA|G|468
7O1C|1|BA|G|469
7O1C|1|BA|A|470
7O1C|1|BA|A|471
7O1C|1|BA|A|472
7O1C|1|BA|G|473
Current chains
- Chain BA
- Ribosomal RNA 23S
Nearby chains
- Chain B2
- 50S ribosomal protein L34
- Chain BE
- 50S ribosomal protein L4
- Chain BQ
- 50S ribosomal protein L20
- Chain BT
- 50S ribosomal protein L23
Coloring options: