J3_7O80_037
3D structure
- PDB id
- 7O80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- (OMC)UGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 7O80|1|A2|U|1478
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O80|1|A2|OMC|1392
7O80|1|A2|U|1393
7O80|1|A2|G|1394
7O80|1|A2|G|1395
7O80|1|A2|C|1396
*
7O80|1|A2|G|1451
7O80|1|A2|G|1452
7O80|1|A2|A|1453
7O80|1|A2|C|1454
7O80|1|A2|A|1455
7O80|1|A2|A|1456
7O80|1|A2|G|1457
*
7O80|1|A2|C|1471
7O80|1|A2|C|1472
7O80|1|A2|C|1473
7O80|1|A2|G|1474
7O80|1|A2|A|1475
7O80|1|A2|G|1476
7O80|1|A2|A|1477
7O80|1|A2|U|1478
7O80|1|A2|U|1479
7O80|1|A2|G|1480
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AF
- RACK1
- Chain AG
- uS14
- Chain Ac
- 40S ribosomal protein S3
- Chain Ae
- Ribosomal protein S5
- Chain Ap
- Ribosomal protein S16
- Chain Aq
- 40S ribosomal protein eS17
- Chain At
- 40S ribosomal protein uS10
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