J3_7OBR_020

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

7OBR|1|5|C|4990, 7OBR|1|5|A|5061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OBR|1|5|C|4970
7OBR|1|5|A|4971
7OBR|1|5|U|4972
*
7OBR|1|5|G|4986
7OBR|1|5|C|4987
7OBR|1|5|U|4988
7OBR|1|5|U|4989
7OBR|1|5|C|4990
7OBR|1|5|U|4991
*
7OBR|1|5|A|5060
7OBR|1|5|A|5061
7OBR|1|5|G|5062
7OBR|1|5|G|5063

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 1

Signal recognition particle RNA; SRP RNA

Chain B

uL3

Chain P

uL22

Chain d

eL31

Chain z

Signal recognition particle subunit SRP72