J3_7OE0_003
3D structure
- PDB id
- 7OE0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pre-30S delta rbfA ribosomal subunit class F
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GGUA*UACCGGUGG*CGGCC
- Length
- 18 nucleotides
- Bulged bases
- 7OE0|1|A|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OE0_003 not in the Motif Atlas
- Geometric match to J3_4V88_033
- Geometric discrepancy: 0.3073
- The information below is about J3_4V88_033
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_38616.1
- Basepair signature
- cWW-F-cWW-F-cWW-F-cWW-F-tWW-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
7OE0|1|A|G|670
7OE0|1|A|G|671
7OE0|1|A|U|672
7OE0|1|A|A|673
*
7OE0|1|A|U|717
7OE0|1|A|A|718
7OE0|1|A|C|719
7OE0|1|A|C|720
7OE0|1|A|G|721
7OE0|1|A|G|722
7OE0|1|A|U|723
7OE0|1|A|G|724
7OE0|1|A|G|725
*
7OE0|1|A|C|732
7OE0|1|A|G|733
7OE0|1|A|G|734
7OE0|1|A|C|735
7OE0|1|A|C|736
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain F
- 30S ribosomal protein S6, fully modified isoform
- Chain O
- 30S ribosomal protein S15
- Chain R
- 30S ribosomal protein S18
Coloring options: