J3_7OE0_015

3D structure

PDB id

7OE0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pre-30S delta rbfA ribosomal subunit class F

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GCACAAG*CUAGUAA*UGAAUACGUUCCC

Length

27 nucleotides

Bulged bases

7OE0|1|A|C|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OE0|1|A|G|933
7OE0|1|A|C|934
7OE0|1|A|A|935
7OE0|1|A|C|936
7OE0|1|A|A|937
7OE0|1|A|A|938
7OE0|1|A|G|939
*
7OE0|1|A|C|1344
7OE0|1|A|U|1345
7OE0|1|A|A|1346
7OE0|1|A|G|1347
7OE0|1|A|U|1348
7OE0|1|A|A|1349
7OE0|1|A|A|1350
*
7OE0|1|A|U|1372
7OE0|1|A|G|1373
7OE0|1|A|A|1374
7OE0|1|A|A|1375
7OE0|1|A|U|1376
7OE0|1|A|A|1377
7OE0|1|A|C|1378
7OE0|1|A|G|1379
7OE0|1|A|U|1380
7OE0|1|A|U|1381
7OE0|1|A|C|1382
7OE0|1|A|C|1383
7OE0|1|A|C|1384

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S7

Chain I

30S ribosomal protein S9