3D structure

PDB id
7OE1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S ribosomal subunit from E. coli
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
CUUG*CAG*CUUACG
Length
13 nucleotides
Bulged bases
7OE1|1|A|U|1212, 7OE1|1|A|C|1214
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7OE1_008 not in the Motif Atlas
Homologous match to J3_5J7L_007
Geometric discrepancy: 0.3616
The information below is about J3_5J7L_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_82572.1
Basepair signature
cWW-tSH-tWW-F-cWW-tHW-F-F-cWW
Number of instances in this motif group
2

Unit IDs

7OE1|1|A|C|990
7OE1|1|A|U|991
7OE1|1|A|U|992
7OE1|1|A|G|993
*
7OE1|1|A|C|1045
7OE1|1|A|A|1046
7OE1|1|A|G|1047
*
7OE1|1|A|C|1210
7OE1|1|A|U|1211
7OE1|1|A|U|1212
7OE1|1|A|A|1213
7OE1|1|A|C|1214
7OE1|1|A|G|1215

Current chains

Chain A
16S rRNA

Nearby chains

Chain N
30S ribosomal protein S14

Coloring options:


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