J3_7OE1_021

3D structure

PDB id

7OE1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit from E. coli

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

CAAUGGC*GUCGUAGUCC*GUCG

Length

21 nucleotides

Bulged bases

7OE1|1|A|U|1240

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OE1|1|A|C|1237
7OE1|1|A|A|1238
7OE1|1|A|A|1239
7OE1|1|A|U|1240
7OE1|1|A|G|1241
7OE1|1|A|G|1242
7OE1|1|A|C|1243
*
7OE1|1|A|G|1294
7OE1|1|A|U|1295
7OE1|1|A|C|1296
7OE1|1|A|G|1297
7OE1|1|A|U|1298
7OE1|1|A|A|1299
7OE1|1|A|G|1300
7OE1|1|A|U|1301
7OE1|1|A|C|1302
7OE1|1|A|C|1303
*
7OE1|1|A|G|1334
7OE1|1|A|U|1335
7OE1|1|A|C|1336
7OE1|1|A|G|1337

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S7

Chain M

30S ribosomal protein S13