J3_7OH3_006
3D structure
- PDB id
- 7OH3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UU*AGAAG*CAUGA
- Length
- 12 nucleotides
- Bulged bases
- 7OH3|1|1|A|1065
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OH3_006 not in the Motif Atlas
- Homologous match to J3_8P9A_051
- Geometric discrepancy: 0.3977
- The information below is about J3_8P9A_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_09667.1
- Basepair signature
- cWW-cWW-F-F-cSS-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OH3|1|1|U|986
7OH3|1|1|U|987
*
7OH3|1|1|A|1062
7OH3|1|1|G|1063
7OH3|1|1|A|1064
7OH3|1|1|A|1065
7OH3|1|1|G|1066
*
7OH3|1|1|C|1092
7OH3|1|1|A|1093
7OH3|1|1|U|1096
7OH3|1|1|G|1097
7OH3|1|1|A|1098
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L7-A
- Chain T
- 60S ribosomal protein L21-A
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