J3_7OHT_002
3D structure
- PDB id
- 7OHT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- AGUUU*AGAAG*CAUUUGAAU
- Length
- 19 nucleotides
- Bulged bases
- 7OHT|1|1|G|984, 7OHT|1|1|A|1065, 7OHT|1|1|U|1094, 7OHT|1|1|U|1095
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OHT|1|1|A|983
7OHT|1|1|G|984
7OHT|1|1|U|985
7OHT|1|1|U|986
7OHT|1|1|U|987
*
7OHT|1|1|A|1062
7OHT|1|1|G|1063
7OHT|1|1|A|1064
7OHT|1|1|A|1065
7OHT|1|1|G|1066
*
7OHT|1|1|C|1092
7OHT|1|1|A|1093
7OHT|1|1|U|1094
7OHT|1|1|U|1095
7OHT|1|1|U|1096
7OHT|1|1|G|1097
7OHT|1|1|A|1098
7OHT|1|1|A|1099
7OHT|1|1|U|1100
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L7-A
- Chain T
- 60S ribosomal protein L21-A
Coloring options: