J3_7OHX_004

3D structure

PDB id

7OHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGG*CCGCUAAGGAGUG*CC

Length

18 nucleotides

Bulged bases

7OHX|1|1|A|1259

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHX|1|1|G|1229
7OHX|1|1|G|1230
7OHX|1|1|G|1234
*
7OHX|1|1|C|1254
7OHX|1|1|C|1255
7OHX|1|1|G|1256
7OHX|1|1|C|1257
7OHX|1|1|U|1258
7OHX|1|1|A|1259
7OHX|1|1|A|1260
7OHX|1|1|G|1261
7OHX|1|1|G|1262
7OHX|1|1|A|1263
7OHX|1|1|G|1264
7OHX|1|1|U|1265
7OHX|1|1|G|1266
*
7OHX|1|1|C|1275
7OHX|1|1|C|1280

Current chains

Chain 1

25S rRNA

Nearby chains

Chain W

Ribosome assembly factor MRT4