J3_7OHX_008
3D structure
- PDB id
- 7OHX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- AGACAUG*UGGG*CAUAAU
- Length
- 17 nucleotides
- Bulged bases
- 7OHX|1|1|C|439, 7OHX|1|1|U|620
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OHX|1|1|A|436
7OHX|1|1|G|437
7OHX|1|1|A|438
7OHX|1|1|C|439
7OHX|1|1|A|440
7OHX|1|1|U|441
7OHX|1|1|G|442
*
7OHX|1|1|U|492
7OHX|1|1|G|493
7OHX|1|1|G|494
7OHX|1|1|G|495
*
7OHX|1|1|C|618
7OHX|1|1|A|619
7OHX|1|1|U|620
7OHX|1|1|A|621
7OHX|1|1|A|622
7OHX|1|1|U|623
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 3
- Protein MAK16
- Chain E
- 60S ribosomal protein L6-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
- Chain x
- Ribosome production factor 1
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