J3_7OIE_006
3D structure
- PDB id
- 7OIE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7OIE|1|A|A|1335, 7OIE|1|A|U|1336
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OIE_006 not in the Motif Atlas
- Homologous match to J3_7RQB_012
- Geometric discrepancy: 0.1141
- The information below is about J3_7RQB_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.3
- Basepair signature
- cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7OIE|1|A|C|1334
7OIE|1|A|A|1335
7OIE|1|A|U|1336
7OIE|1|A|C|1337
*
7OIE|1|A|G|1362
7OIE|1|A|U|1363
7OIE|1|A|U|1364
*
7OIE|1|A|A|1378
7OIE|1|A|U|1379
7OIE|1|A|U|1380
7OIE|1|A|A|1381
7OIE|1|A|A|1382
7OIE|1|A|A|1383
7OIE|1|A|G|1384
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: