J3_7OOD_009

3D structure

PDB id

7OOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGACAA*UUC*GAAAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OOD|1|3|U|1453
7OOD|1|3|G|1454
7OOD|1|3|A|1455
7OOD|1|3|C|1456
7OOD|1|3|A|1457
7OOD|1|3|A|1458
*
7OOD|1|3|U|1597
7OOD|1|3|U|1598
7OOD|1|3|C|1599
*
7OOD|1|3|G|1602
7OOD|1|3|A|1603
7OOD|1|3|A|1604
7OOD|1|3|A|1605
7OOD|1|3|A|1606
7OOD|1|3|G|1607

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain a

50S ribosomal protein L2