J3_7OPE_006
3D structure
- PDB id
- 7OPE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGA*UUUAAAG*CAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OPE_006 not in the Motif Atlas
- Homologous match to J3_5J7L_040
- Geometric discrepancy: 0.1769
- The information below is about J3_5J7L_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_28621.5
- Basepair signature
- cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F
- Number of instances in this motif group
- 7
Unit IDs
7OPE|1|A|G|1101
7OPE|1|A|G|1102
7OPE|1|A|A|1103
*
7OPE|1|A|U|1127
7OPE|1|A|U|1128
7OPE|1|A|U|1129
7OPE|1|A|A|1130
7OPE|1|A|A|1131
7OPE|1|A|A|1132
7OPE|1|A|G|1133
*
7OPE|1|A|C|1148
7OPE|1|A|A|1149
7OPE|1|A|C|1150
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L11
- Chain L
- 50S ribosomal protein L10
- Chain j
- 50S ribosomal protein L36
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