J3_7OSA_025
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUC*GAA*UAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 7OSA|1|25S|A|2703
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OSA_025 not in the Motif Atlas
- Homologous match to J3_8P9A_062
- Geometric discrepancy: 0.0891
- The information below is about J3_8P9A_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_61124.2
- Basepair signature
- cWW-tWH-tWW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7OSA|1|25S|C|2664
7OSA|1|25S|U|2665
7OSA|1|25S|C|2666
*
7OSA|1|25S|G|2690
7OSA|1|25S|A|2691
7OSA|1|25S|A|2692
*
7OSA|1|25S|U|2701
7OSA|1|25S|A|2702
7OSA|1|25S|A|2703
7OSA|1|25S|A|2704
7OSA|1|25S|A|2705
7OSA|1|25S|G|2706
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain AB
- 5S ribosomal RNA; 5S rRNA
- Chain eL21
- BJ4_G0003770.mRNA.1.CDS.1
- Chain uL18
- 60S ribosomal protein L5
- Chain uL5
- BJ4_G0027750.mRNA.1.CDS.1
Coloring options: