J3_7OSA_027
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAU*AGAUG*CUG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OSA_027 not in the Motif Atlas
- Homologous match to J3_8P9A_065
- Geometric discrepancy: 0.1145
- The information below is about J3_8P9A_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_81015.1
- Basepair signature
- cWW-cWW-F-cWW-F-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
7OSA|1|25S|C|3298
7OSA|1|25S|A|3299
7OSA|1|25S|U|3300
*
7OSA|1|25S|A|3314
7OSA|1|25S|G|3315
7OSA|1|25S|A|3316
7OSA|1|25S|U|3317
7OSA|1|25S|G|3318
*
7OSA|1|25S|C|3388
7OSA|1|25S|U|3389
7OSA|1|25S|G|3390
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL31
- BJ4_G0008090.mRNA.1.CDS.1
- Chain uL22
- BJ4_G0005750.mRNA.1.CDS.1
- Chain uL3
- 60S ribosomal protein L3
Coloring options: