J3_7OSA_043
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AC*GAUACGU*AAUCU
- Length
- 14 nucleotides
- Bulged bases
- 7OSA|1|58S|U|60, 7OSA|1|58S|C|62
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OSA_043 not in the Motif Atlas
- Homologous match to J3_8P9A_067
- Geometric discrepancy: 0.0814
- The information below is about J3_8P9A_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7OSA|1|58S|A|44
7OSA|1|58S|C|45
*
7OSA|1|58S|G|58
7OSA|1|58S|A|59
7OSA|1|58S|U|60
7OSA|1|58S|A|61
7OSA|1|58S|C|62
7OSA|1|58S|G|63
7OSA|1|58S|U|64
*
7OSA|1|58S|A|96
7OSA|1|58S|A|97
7OSA|1|58S|U|98
7OSA|1|58S|C|99
7OSA|1|58S|U|100
Current chains
- Chain 58S
- 5.8S rRNA
Nearby chains
- Chain eL37
- Ribosomal protein L37
- Chain eL39
- 60S ribosomal protein L39
- Chain uL23
- 60S ribosomal protein L25
- Chain uL29
- BJ4_G0044250.mRNA.1.CDS.1
Coloring options: