J3_7OSM_007
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGGAG*CUAC*GGAA
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OSM|1|18S|U|1168
7OSM|1|18S|G|1169
7OSM|1|18S|G|1170
7OSM|1|18S|A|1171
7OSM|1|18S|G|1172
*
7OSM|1|18S|C|1467
7OSM|1|18S|U|1468
7OSM|1|18S|A|1469
7OSM|1|18S|C|1470
*
7OSM|1|18S|G|1574
7OSM|1|18S|G|1575
7OSM|1|18S|A|1576
7OSM|1|18S|A|1577
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain PSIT
- Transfer RNA; tRNA
- Chain eS19
- 40S ribosomal protein S19-A
- Chain uS13
- 40S ribosomal protein S18-B
- Chain uS7
- Rps5p
- Chain uS9
- BJ4_G0008010.mRNA.1.CDS.1
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