J3_7OSM_028

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUUUG*CUUAGAUG*CUG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|25S|C|3298
7OSM|1|25S|A|3299
7OSM|1|25S|U|3300
7OSM|1|25S|U|3301
7OSM|1|25S|U|3302
7OSM|1|25S|G|3303
*
7OSM|1|25S|C|3311
7OSM|1|25S|U|3312
7OSM|1|25S|U|3313
7OSM|1|25S|A|3314
7OSM|1|25S|G|3315
7OSM|1|25S|A|3316
7OSM|1|25S|U|3317
7OSM|1|25S|G|3318
*
7OSM|1|25S|C|3388
7OSM|1|25S|U|3389
7OSM|1|25S|G|3390

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL31

BJ4_G0008090.mRNA.1.CDS.1

Chain uL22

BJ4_G0005750.mRNA.1.CDS.1

Chain uL3

60S ribosomal protein L3