J3_7OSM_037
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAAC*GGACUA*UGGAAGUUUG
- Length
- 20 nucleotides
- Bulged bases
- 7OSM|1|18S|U|1390, 7OSM|1|18S|U|1413, 7OSM|1|18S|U|1414
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OSM|1|18S|U|1335
7OSM|1|18S|A|1336
7OSM|1|18S|A|1337
7OSM|1|18S|C|1338
*
7OSM|1|18S|G|1386
7OSM|1|18S|G|1387
7OSM|1|18S|A|1388
7OSM|1|18S|C|1389
7OSM|1|18S|U|1390
7OSM|1|18S|A|1391
*
7OSM|1|18S|U|1407
7OSM|1|18S|G|1408
7OSM|1|18S|G|1409
7OSM|1|18S|A|1410
7OSM|1|18S|A|1411
7OSM|1|18S|G|1412
7OSM|1|18S|U|1413
7OSM|1|18S|U|1414
7OSM|1|18S|U|1415
7OSM|1|18S|G|1416
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain RACK
- BJ4_G0022010.mRNA.1.CDS.1
- Chain eS17
- BJ4_G0020710.mRNA.1.CDS.1
- Chain uS10
- 40S ribosomal protein S20
- Chain uS14
- HLJ1_G0030400.mRNA.1.CDS.1
- Chain uS7
- Rps5p
- Chain uS9
- BJ4_G0008010.mRNA.1.CDS.1
Coloring options: