J3_7OSM_038

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CACUGA*UCGUGCUGG*CGAG

Length

19 nucleotides

Bulged bases

7OSM|1|18S|U|1473, 7OSM|1|18S|G|1539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|18S|C|1470
7OSM|1|18S|A|1471
7OSM|1|18S|C|1472
7OSM|1|18S|U|1473
7OSM|1|18S|G|1474
7OSM|1|18S|A|1475
*
7OSM|1|18S|U|1532
7OSM|1|18S|C|1533
7OSM|1|18S|G|1534
7OSM|1|18S|U|1535
7OSM|1|18S|G|1536
7OSM|1|18S|C|1537
7OSM|1|18S|U|1538
7OSM|1|18S|G|1539
7OSM|1|18S|G|1540
*
7OSM|1|18S|C|1571
7OSM|1|18S|G|1572
7OSM|1|18S|A|1573
7OSM|1|18S|G|1574

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS19

40S ribosomal protein S19-A

Chain eS25

40S ribosomal protein S25

Chain uS13

40S ribosomal protein S18-B

Chain uS7

Rps5p