J3_7OSM_050

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCAUAU*AGC*GUG

Length

12 nucleotides

Bulged bases

7OSM|1|AB|U|12

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|AB|C|9
7OSM|1|AB|C|10
7OSM|1|AB|A|11
7OSM|1|AB|U|12
7OSM|1|AB|A|13
7OSM|1|AB|U|14
*
7OSM|1|AB|A|66
7OSM|1|AB|G|67
7OSM|1|AB|C|68
*
7OSM|1|AB|G|110
7OSM|1|AB|U|111
7OSM|1|AB|G|112

Current chains

Chain AB

5S rRNA

Nearby chains

Chain 25S

Large subunit ribosomal RNA; LSU rRNA

Chain eL21

BJ4_G0003770.mRNA.1.CDS.1

Chain uL16

60S ribosomal protein L10

Chain uL18

60S ribosomal protein L5