J3_7OSM_051
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGGAUAGCUCAGUCGGUAGAGCAG*CGUGUCCUUGG*CGAGUCCG
- Length
- 43 nucleotides
- Bulged bases
- 7OSM|1|ASIT|C|17, 7OSM|1|ASIT|G|18, 7OSM|1|ASIT|U|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OSM|1|ASIT|C|4
7OSM|1|ASIT|G|5
7OSM|1|ASIT|G|6
7OSM|1|ASIT|A|7
7OSM|1|ASIT|U|8
7OSM|1|ASIT|A|9
7OSM|1|ASIT|G|10
7OSM|1|ASIT|C|11
7OSM|1|ASIT|U|12
7OSM|1|ASIT|C|13
7OSM|1|ASIT|A|14
7OSM|1|ASIT|G|15
7OSM|1|ASIT|U|16
7OSM|1|ASIT|C|17
7OSM|1|ASIT|G|18
7OSM|1|ASIT|G|19
7OSM|1|ASIT|U|20
7OSM|1|ASIT|A|21
7OSM|1|ASIT|G|22
7OSM|1|ASIT|A|23
7OSM|1|ASIT|G|24
7OSM|1|ASIT|C|25
7OSM|1|ASIT|A|26
7OSM|1|ASIT|G|27
*
7OSM|1|ASIT|C|43
7OSM|1|ASIT|G|44
7OSM|1|ASIT|U|45
7OSM|1|ASIT|G|46
7OSM|1|ASIT|U|47
7OSM|1|ASIT|C|48
7OSM|1|ASIT|C|49
7OSM|1|ASIT|U|50
7OSM|1|ASIT|U|51
7OSM|1|ASIT|G|52
7OSM|1|ASIT|G|53
*
7OSM|1|ASIT|C|62
7OSM|1|ASIT|G|63
7OSM|1|ASIT|A|64
7OSM|1|ASIT|G|65
7OSM|1|ASIT|U|66
7OSM|1|ASIT|C|67
7OSM|1|ASIT|C|68
7OSM|1|ASIT|G|69
Current chains
- Chain ASIT
- PHE tRNA
Nearby chains
- Chain 18S
- Small subunit ribosomal RNA; SSU rRNA
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain eEF2
- Elongation factor 2
- Chain eL42
- BJ4_G0001880.mRNA.1.CDS.1
- Chain uL16
- 60S ribosomal protein L10
- Chain uL5
- BJ4_G0027750.mRNA.1.CDS.1
- Chain uS19
- 40S ribosomal protein S15
Coloring options: