J3_7OT5_021

3D structure

PDB id

7OT5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-70 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7OT5_021 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.1252

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_84394.1

Basepair signature

cWW-tWH-F-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

7OT5|1|2|C|990
7OT5|1|2|U|991
7OT5|1|2|U|992
7OT5|1|2|G|993
*
7OT5|1|2|C|1045
7OT5|1|2|A|1046
7OT5|1|2|G|1047
*
7OT5|1|2|C|1210
7OT5|1|2|U|1211
7OT5|1|2|U|1212
7OT5|1|2|A|1213
7OT5|1|2|C|1214
7OT5|1|2|G|1215

Current chains

Chain 2

16S rRNA

Nearby chains

Chain r

30S ribosomal protein S14