J3_7OW7_013
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGGG*CGCUUCUGGCGCCAAG*CGAC
- Length
- 24 nucleotides
- Bulged bases
- 7OW7|1|A|C|4116, 7OW7|1|A|U|4117, 7OW7|1|A|U|4118, 7OW7|1|A|G|4121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7OW7_013 not in the Motif Atlas
- Homologous match to J3_8C3A_009
- Geometric discrepancy: 0.2758
- The information below is about J3_8C3A_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_02167.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-tHH-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
7OW7|1|A|G|4091
7OW7|1|A|G|4092
7OW7|1|A|G|4093
7OW7|1|A|G|4094
*
7OW7|1|A|C|4114
7OW7|1|A|G|4115
7OW7|1|A|C|4116
7OW7|1|A|U|4117
7OW7|1|A|U|4118
7OW7|1|A|C|4119
7OW7|1|A|U|4120
7OW7|1|A|G|4121
7OW7|1|A|G|4122
7OW7|1|A|C|4123
7OW7|1|A|G|4124
7OW7|1|A|C|4125
7OW7|1|A|C|4126
7OW7|1|A|A|4127
7OW7|1|A|A|4128
7OW7|1|A|G|4129
*
7OW7|1|A|C|4155
7OW7|1|A|G|4156
7OW7|1|A|A|4157
7OW7|1|A|C|4158
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L8
- Chain T
- 60S ribosomal protein L27
- Chain W
- 60S ribosomal protein L30
- Chain a
- 60S ribosomal protein L34
- Chain j
- 60S ribosomal protein L37a
- Chain n
- 60S ribosomal protein L7a
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