J3_7OW7_019

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

7OW7|1|A|A|218, 7OW7|1|A|G|219, 7OW7|1|A|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OW7|1|A|C|196
7OW7|1|A|A|197
7OW7|1|A|A|198
7OW7|1|A|G|199
*
7OW7|1|A|C|215
7OW7|1|A|C|216
7OW7|1|A|C|217
7OW7|1|A|A|218
7OW7|1|A|G|219
7OW7|1|A|C|220
7OW7|1|A|C|221
7OW7|1|A|C|222
7OW7|1|A|G|223
7OW7|1|A|U|224
7OW7|1|A|G|225
7OW7|1|A|G|226
7OW7|1|A|A|227
7OW7|1|A|C|228
*
7OW7|1|A|G|240
7OW7|1|A|G|241
7OW7|1|A|U|242
7OW7|1|A|A|243
7OW7|1|A|G|244

Current chains

Chain A

28S rRNA

Nearby chains

Chain F

60S ribosomal protein L4

Chain S

60S ribosomal protein L26