J3_7P48_020
3D structure
- PDB id
- 7P48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus ribosome in complex with Sal(B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUUG*CAG*CUUAUG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P48_020 not in the Motif Atlas
- Homologous match to J3_4LFB_005
- Geometric discrepancy: 0.1831
- The information below is about J3_4LFB_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_84394.1
- Basepair signature
- cWW-tWH-F-F-cWW-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
7P48|1|a|C|999
7P48|1|a|U|1000
7P48|1|a|U|1001
7P48|1|a|G|1002
*
7P48|1|a|C|1056
7P48|1|a|A|1057
7P48|1|a|G|1058
*
7P48|1|a|C|1220
7P48|1|a|U|1221
7P48|1|a|U|1222
7P48|1|a|A|1223
7P48|1|a|U|1224
7P48|1|a|G|1225
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: