J3_7P7Q_011
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7P7Q|1|A|A|2531, 7P7Q|1|A|U|2532
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P7Q_011 not in the Motif Atlas
- Homologous match to J3_4WF9_009
- Geometric discrepancy: 0.0706
- The information below is about J3_4WF9_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.6
- Basepair signature
- cWW-cWH-cWW-tWH-tSS-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
7P7Q|1|A|C|2530
7P7Q|1|A|A|2531
7P7Q|1|A|U|2532
7P7Q|1|A|C|2533
*
7P7Q|1|A|G|2558
7P7Q|1|A|U|2559
7P7Q|1|A|U|2560
*
7P7Q|1|A|A|2574
7P7Q|1|A|U|2575
7P7Q|1|A|U|2576
7P7Q|1|A|A|2577
7P7Q|1|A|A|2578
7P7Q|1|A|A|2579
7P7Q|1|A|G|2580
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain N
- 50S ribosomal protein L14
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