J3_7P7Q_021
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 7P7Q|1|a|A|1002, 7P7Q|1|a|G|1003, 7P7Q|1|a|A|1005
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P7Q_021 not in the Motif Atlas
- Homologous match to J3_4LFB_004
- Geometric discrepancy: 0.0674
- The information below is about J3_4LFB_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88451.2
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7P7Q|1|a|U|982
7P7Q|1|a|U|983
7P7Q|1|a|U|984
7P7Q|1|a|A|985
7P7Q|1|a|A|986
7P7Q|1|a|U|987
7P7Q|1|a|U|988
7P7Q|1|a|C|989
*
7P7Q|1|a|G|1000
7P7Q|1|a|A|1001
7P7Q|1|a|A|1002
7P7Q|1|a|G|1003
7P7Q|1|a|A|1004
7P7Q|1|a|A|1005
7P7Q|1|a|C|1006
7P7Q|1|a|C|1007
7P7Q|1|a|U|1008
7P7Q|1|a|U|1009
7P7Q|1|a|A|1010
7P7Q|1|a|C|1011
*
7P7Q|1|a|G|1247
7P7Q|1|a|G|1248
7P7Q|1|a|C|1249
7P7Q|1|a|U|1250
7P7Q|1|a|A|1251
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain k
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S13
- Chain o
- 30S ribosomal protein S14 type Z
- Chain t
- 30S ribosomal protein S19
Coloring options: