J3_7P7Q_027
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CAAUG*CUCAGUUC*GCCG
- Length
- 17 nucleotides
- Bulged bases
- 7P7Q|1|a|U|1266, 7P7Q|1|a|U|1328
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P7Q_027 not in the Motif Atlas
- Homologous match to J3_4LFB_009
- Geometric discrepancy: 0.1212
- The information below is about J3_4LFB_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_03192.2
- Basepair signature
- cWW-cSS-tHW-F-F-F-cWW-cWW-cSH-cSH-F
- Number of instances in this motif group
- 6
Unit IDs
7P7Q|1|a|C|1263
7P7Q|1|a|A|1264
7P7Q|1|a|A|1265
7P7Q|1|a|U|1266
7P7Q|1|a|G|1267
*
7P7Q|1|a|C|1322
7P7Q|1|a|U|1323
7P7Q|1|a|C|1324
7P7Q|1|a|A|1325
7P7Q|1|a|G|1326
7P7Q|1|a|U|1327
7P7Q|1|a|U|1328
7P7Q|1|a|C|1329
*
7P7Q|1|a|G|1360
7P7Q|1|a|C|1361
7P7Q|1|a|C|1362
7P7Q|1|a|G|1363
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain 0
- ARE-ABC-F family resistance factor PoxtA
- Chain h
- 30S ribosomal protein S7
- Chain n
- 30S ribosomal protein S13
Coloring options: