J3_7P7R_004

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAUCUA*UAG*CGAA

Length

14 nucleotides

Bulged bases

7P7R|1|A|U|725, 7P7R|1|A|G|831, 7P7R|1|A|A|832

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7P7R_004 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0705

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7P7R|1|A|U|722
7P7R|1|A|G|723
7P7R|1|A|A|724
7P7R|1|A|U|725
7P7R|1|A|C|726
7P7R|1|A|U|727
7P7R|1|A|A|728
*
7P7R|1|A|U|812
7P7R|1|A|A|813
7P7R|1|A|G|814
*
7P7R|1|A|C|830
7P7R|1|A|G|831
7P7R|1|A|A|832
7P7R|1|A|A|833

Current chains

Chain A

23S rRNA

Nearby chains

Chain 6

50S ribosomal protein L34

Chain G

50S ribosomal protein L2