J3_7P7R_005

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7P7R_005 not in the Motif Atlas

Homologous match to J3_7RQB_005

Geometric discrepancy: 0.0631

The information below is about J3_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.4

Basepair signature

cWW-tSH-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

7P7R|1|A|C|737
7P7R|1|A|A|738
7P7R|1|A|G|739
*
7P7R|1|A|C|771
7P7R|1|A|G|772
7P7R|1|A|A|773
7P7R|1|A|A|774
7P7R|1|A|C|775
*
7P7R|1|A|G|799
7P7R|1|A|A|800
7P7R|1|A|U|801
7P7R|1|A|G|802

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L2