J3_7P7R_037

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUGACAU*ACAG*CUUAUG

Length

18 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7P7R_037 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.123

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7P7R|1|a|C|1017
7P7R|1|a|U|1018
7P7R|1|a|U|1019
7P7R|1|a|G|1020
7P7R|1|a|A|1021
7P7R|1|a|C|1022
7P7R|1|a|A|1023
7P7R|1|a|U|1024
*
7P7R|1|a|A|1071
7P7R|1|a|C|1072
7P7R|1|a|A|1073
7P7R|1|a|G|1074
*
7P7R|1|a|C|1236
7P7R|1|a|U|1237
7P7R|1|a|U|1238
7P7R|1|a|A|1239
7P7R|1|a|U|1240
7P7R|1|a|G|1241

Current chains

Chain a

16S rRNA

Nearby chains

Chain o

30S ribosomal protein S14 type Z