J3_7P7R_040
3D structure
- PDB id
- 7P7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAU*AGACUGC*GAGGAAGGUG
- Length
- 20 nucleotides
- Bulged bases
- 7P7R|1|a|U|1209
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7P7R_040 not in the Motif Atlas
- Homologous match to J3_5J7L_054
- Geometric discrepancy: 0.1174
- The information below is about J3_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17791.2
- Basepair signature
- cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7P7R|1|a|U|1143
7P7R|1|a|A|1144
7P7R|1|a|U|1145
*
7P7R|1|a|A|1181
7P7R|1|a|G|1182
7P7R|1|a|A|1183
7P7R|1|a|C|1184
7P7R|1|a|U|1185
7P7R|1|a|G|1186
7P7R|1|a|C|1187
*
7P7R|1|a|G|1201
7P7R|1|a|A|1202
7P7R|1|a|G|1203
7P7R|1|a|G|1204
7P7R|1|a|A|1205
7P7R|1|a|A|1206
7P7R|1|a|G|1207
7P7R|1|a|G|1208
7P7R|1|a|U|1209
7P7R|1|a|G|1210
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S2
- Chain j
- 30S ribosomal protein S9
- Chain k
- 30S ribosomal protein S10
- Chain o
- 30S ribosomal protein S14 type Z
Coloring options: