3D structure

PDB id
7PHC (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
Experimental method
ELECTRON MICROSCOPY
Resolution
9.9 Å

Loop

Sequence
UAGACUUGACAUCCUU*GAGUGACAG*CUUAUGUCUA
Length
35 nucleotides
Bulged bases
7PHC|1|5|U|1186, 7PHC|1|5|U|1187, 7PHC|1|5|U|1189
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PHC|1|5|U|981
7PHC|1|5|A|982
7PHC|1|5|G|983
7PHC|1|5|A|984
7PHC|1|5|C|985
7PHC|1|5|U|986
7PHC|1|5|U|987
7PHC|1|5|G|988
7PHC|1|5|A|989
7PHC|1|5|C|990
7PHC|1|5|A|991
7PHC|1|5|U|992
7PHC|1|5|C|993
7PHC|1|5|C|994
7PHC|1|5|U|995
7PHC|1|5|U|996
*
7PHC|1|5|G|1030
7PHC|1|5|A|1031
7PHC|1|5|G|1032
7PHC|1|5|U|1033
7PHC|1|5|G|1034
7PHC|1|5|A|1035
7PHC|1|5|C|1036
7PHC|1|5|A|1037
7PHC|1|5|G|1038
*
7PHC|1|5|C|1185
7PHC|1|5|U|1186
7PHC|1|5|U|1187
7PHC|1|5|A|1188
7PHC|1|5|U|1189
7PHC|1|5|G|1190
7PHC|1|5|U|1191
7PHC|1|5|C|1192
7PHC|1|5|U|1193
7PHC|1|5|A|1194

Current chains

Chain 5
16S ribosomal RNA

Nearby chains

Chain M
30S ribosomal protein S14 type Z
Chain R
30S ribosomal protein S19

Coloring options:

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