J3_7PHC_036
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- GUA*UCAUAGUGAUCC*GCUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 7PHC|1|3|A|2396, 7PHC|1|3|A|2434
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PHC_036 not in the Motif Atlas
- Homologous match to J3_5J7L_070
- Geometric discrepancy: 0.2685
- The information below is about J3_5J7L_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_20992.1
- Basepair signature
- cWW-F-F-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7PHC|1|3|G|2290
7PHC|1|3|U|2291
7PHC|1|3|A|2292
*
7PHC|1|3|U|2392
7PHC|1|3|C|2393
7PHC|1|3|A|2394
7PHC|1|3|U|2395
7PHC|1|3|A|2396
7PHC|1|3|G|2397
7PHC|1|3|U|2398
7PHC|1|3|G|2399
7PHC|1|3|A|2400
7PHC|1|3|U|2401
7PHC|1|3|C|2402
7PHC|1|3|C|2403
*
7PHC|1|3|G|2429
7PHC|1|3|C|2430
7PHC|1|3|U|2431
7PHC|1|3|C|2432
7PHC|1|3|A|2433
7PHC|1|3|A|2434
7PHC|1|3|C|2435
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L35
- Chain 8
- Transfer RNA; tRNA
- Chain k
- 50S ribosomal protein L15
- Chain u
- 50S ribosomal protein L27
- Chain z
- 50S ribosomal protein L33 1
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