J3_7PIA_007
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7PIA|1|3|A|2526
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7PIA_007 not in the Motif Atlas
- Homologous match to J3_5J7L_046
- Geometric discrepancy: 0.2949
- The information below is about J3_5J7L_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.5
- Basepair signature
- cWW-tWH-cHW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
7PIA|1|3|C|2525
7PIA|1|3|A|2526
7PIA|1|3|U|2527
7PIA|1|3|C|2528
*
7PIA|1|3|G|2553
7PIA|1|3|U|2554
7PIA|1|3|U|2555
*
7PIA|1|3|A|2569
7PIA|1|3|U|2570
7PIA|1|3|U|2571
7PIA|1|3|A|2572
7PIA|1|3|A|2573
7PIA|1|3|A|2574
7PIA|1|3|G|2575
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain i
- 50S ribosomal protein L13
- Chain j
- 50S ribosomal protein L14
Coloring options: