J3_7PIA_013

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

GGUGGA*UAC*GGAAUC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PIA|1|5|G|936
7PIA|1|5|G|937
7PIA|1|5|U|938
7PIA|1|5|G|939
7PIA|1|5|G|940
7PIA|1|5|A|941
*
7PIA|1|5|U|1210
7PIA|1|5|A|1211
7PIA|1|5|C|1212
*
7PIA|1|5|G|1311
7PIA|1|5|G|1312
7PIA|1|5|A|1313
7PIA|1|5|A|1314
7PIA|1|5|U|1315
7PIA|1|5|C|1316

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain 8

Transfer RNA; tRNA

Chain F

30S ribosomal protein S7

Chain H

30S ribosomal protein S9

Chain L

30S ribosomal protein S13