J3_7PIA_016

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

UGUC*GAUGUU*GCAA

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PIA|1|5|U|1064
7PIA|1|5|G|1065
7PIA|1|5|U|1066
7PIA|1|5|C|1067
*
7PIA|1|5|G|1072
7PIA|1|5|A|1073
7PIA|1|5|U|1074
7PIA|1|5|G|1075
7PIA|1|5|U|1076
7PIA|1|5|U|1077
*
7PIA|1|5|G|1090
7PIA|1|5|C|1091
7PIA|1|5|A|1092
7PIA|1|5|A|1093

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain A

30S ribosomal protein S2

Chain D

30S ribosomal protein S5