3D structure

PDB id
7PIB (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
Experimental method
ELECTRON MICROSCOPY
Resolution
4.7 Å

Loop

Sequence
GUA*UCAUAGUGAUCCG*CGCUCAAC
Length
24 nucleotides
Bulged bases
7PIB|1|3|A|2434
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PIB|1|3|G|2290
7PIB|1|3|U|2291
7PIB|1|3|A|2292
*
7PIB|1|3|U|2392
7PIB|1|3|C|2393
7PIB|1|3|A|2394
7PIB|1|3|U|2395
7PIB|1|3|A|2396
7PIB|1|3|G|2397
7PIB|1|3|U|2398
7PIB|1|3|G|2399
7PIB|1|3|A|2400
7PIB|1|3|U|2401
7PIB|1|3|C|2402
7PIB|1|3|C|2403
7PIB|1|3|G|2404
*
7PIB|1|3|C|2428
7PIB|1|3|G|2429
7PIB|1|3|C|2430
7PIB|1|3|U|2431
7PIB|1|3|C|2432
7PIB|1|3|A|2433
7PIB|1|3|A|2434
7PIB|1|3|C|2435

Current chains

Chain 3
23S ribosomal RNA

Nearby chains

Chain 1
50S ribosomal protein L35
Chain k
50S ribosomal protein L15
Chain u
50S ribosomal protein L27
Chain z
50S ribosomal protein L33 1

Coloring options:

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