3D structure

PDB id
7PIB (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
Experimental method
ELECTRON MICROSCOPY
Resolution
4.7 Å

Loop

Sequence
UUCAGU*AUGUAGAG*UGUAAG
Length
20 nucleotides
Bulged bases
7PIB|1|3|A|2344
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PIB|1|3|U|2303
7PIB|1|3|U|2304
7PIB|1|3|C|2305
7PIB|1|3|A|2306
7PIB|1|3|G|2307
7PIB|1|3|U|2308
*
7PIB|1|3|A|2324
7PIB|1|3|U|2325
7PIB|1|3|G|2326
7PIB|1|3|U|2327
7PIB|1|3|A|2328
7PIB|1|3|G|2329
7PIB|1|3|A|2330
7PIB|1|3|G|2331
*
7PIB|1|3|U|2340
7PIB|1|3|G|2341
7PIB|1|3|U|2342
7PIB|1|3|A|2343
7PIB|1|3|A|2344
7PIB|1|3|G|2345

Current chains

Chain 3
23S ribosomal RNA

Nearby chains

Chain 4
5S ribosomal RNA; 5S rRNA
Chain d
50S ribosomal protein L5
Chain n
50S ribosomal protein L18
Chain u
50S ribosomal protein L27

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.0965 s